Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952688.1_cds_XP_016492241.1_82473
CDS Infomation

[gene=LOC107811762] [db_xref=GeneID:107811762] [protein=protein tesmin/TSO1-like CXC 2 isoform X3] [protein_id=XP_016492241.1] [location=complement(join(812..1190,1300..1459,1646..1712,1799..1894,1985..2165,7735..7806,7895..8376,9197..9841))] [gbkey=CDS]
Sequence

ATGTTAGATGCTGTAAATAACTCAATTGAGCCCAAGGAGAGTTTTGGTTGTGGGATTTCT
GGGGGTGAAGCACCGGCTTCACCATCCCATGAATGCTCAAAGCTTGCAGTTGAGCTTGCA
AGAAGTCTAAATTATGAGTGCAGCAGTCCCAGTACTTTACCGACTGGGGGCATAAAAGGT
AAGAGTTTGTCAGAATTTGCAGGCACTTCTGTGACATATGTCCCTTTAGTACAAGAGATA
TCTGGAAAAGGTTTGCTGAGATGTGAGGTGAATATGGATGGGACAAATGAAATTGGTCCA
GATAAAGGAGAAGCTTCAGGATGTGATTGGGAGAGTTTGATTACTGATGCTACGGATCTA
CTAATCTTTGACTCACCTGGTGACCCTGAGGCTTTCACGAAAGCATCAGGTCCTAATTTT
AGGACCTTTGAATATGTCTCAAATGAAATACAGAATGTGCAACATTTTAGTCAGGTTAGT
ACCAGTGAATGTGGTGGAGATGGAAGTGAAACAGAGAAACCATCTACTCAACCCGGGGAG
GAAAGTCAACTCAAGGAATATGCTGACGCTGAAAACATGAAACCTGATGCTTCTCTAACC
AATGATGGCACGGGTGTCGGTCAAAGTGAAAAAAATGATAATGAGATGGTCTCTGCTTTA
TACCGTGGAATGAGAAGACGCTGTCTAGTGTTCGAGATGGTGGGACCTCGAAGAAAGCAT
ATAGATGAAGGTTCTGGTTCTTCTGCTGCACAAGAAGTTGATGGGAACGTTGTCTCCAAC
GATAAGCAACTAGTACCTTCTAAGACTGTAAATGAATATCTGCGATGCACTTTACCTGGA
ATTGGCTTGCATTTAAATTCTCTTACAGCATCCTCAAAAGATGGCAAAGTTGTCAAGCAA
GAGGCTAATGCTTCCGGGAAACAGCTTGTAATTGCATCTGGCTCATCTATCAATCTTCAT
TCTTCGGTTACTGGTCAAGAATCTCTGGTTAAATCTCTGCCTGAAACCTCTAGAGGAGGA
GAAATTGTTCCTTTTGAGAATAGTTTACCCCTTATGGAGGATGTTTTCCAGGCACCTGGA
TATGTAAATAGTGAAGAGCCTAATCAGACTAGTCCGAAGAAAAAGAGGCGTCGATTGGAA
ACTGGAGAAGGTGAATCATGCAAGCGCTGTAACTGTAAAAAATCAAAATGCTTGAAACTT
TACTGTGAATGTTTTGCTGCTGGAGTCTACTGTGTGGAGCCATGTGCATGTCAAGACTGC
TTCAACAAGCCTATTCATGAAGATACTGTCCTTGCAACTCGCAAACAGATCGAATCACGA
AACCCTCTTGCTTTTGCTCCTAAAGTGATAAGGACCACCGACTCTATTTCTGAAACAGGG
GATGATTCCAGCAAGACTCCTGCCTCAGCTCGTCACAAGAGAGGATGCAACTGCAAGAAA
TCTGGTTGCCTGAAGAAATATTGTGAATGCTATCAGGGTGGGGTCGGATGCTCCATCAAT
TGCAGATGTGAAGGATGCAAGAATGCATTTGGCAGAAAGGATGGTTCTATTTTCATAGGC
ATAGATGGGGATGCAGAGGAAGAGGAAACAGATGCATATGAAAAGAGTATTGTCGATAGA
ACTTCTCATAAGAACCTTGTACAGAGTGATATCGAGCAGAATCCAGATTCTGCTCCCCCT
GCTACACCATTAAGTTTTGGAAGACCACCAATGCAGCTCCCATTTTCATTGAAGAACAAA
CCGCCTCGATCATCATTTCTATCTATCGGATCCTCCTCATCTGGTGGTATATATGGTGCT
GGGCAAGGGGTTGGAAGGCTGAATTTGTTTCAACCTCAACCCAAGTTTGACAAGCCATTT
GAGTCGGTTCAAGTTGAAGAAGATGAAATAATGCCTGAGATACTCCAAGGGACTAAGTCT
CCAGTCAGTGGCATTAAGACAGCCTCTCCGAACAGGAAGAGAGTTTCTCCTCCTCATTGT
GACTATGGGAATTCACATTCGCATTCACCCGGTCGTCGAAGCAGCCGCAAGTTGATACTG
CAATCCATCCCTTCATTTCCCTCCCTCACTCCCAACCCTTGA

Peptide Sequence

PEP ID

XP_016492241.1
PEP Infomation

PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X3 [Nicotiana tabacum]
Sequence

MLDAVNNSIEPKESFGCGISGGEAPASPSHECSKLAVELARSLNYECSSPSTLPTGGIKG
KSLSEFAGTSVTYVPLVQEISGKGLLRCEVNMDGTNEIGPDKGEASGCDWESLITDATDL
LIFDSPGDPEAFTKASGPNFRTFEYVSNEIQNVQHFSQVSTSECGGDGSETEKPSTQPGE
ESQLKEYADAENMKPDASLTNDGTGVGQSEKNDNEMVSALYRGMRRRCLVFEMVGPRRKH
IDEGSGSSAAQEVDGNVVSNDKQLVPSKTVNEYLRCTLPGIGLHLNSLTASSKDGKVVKQ
EANASGKQLVIASGSSINLHSSVTGQESLVKSLPETSRGGEIVPFENSLPLMEDVFQAPG
YVNSEEPNQTSPKKKRRRLETGEGESCKRCNCKKSKCLKLYCECFAAGVYCVEPCACQDC
FNKPIHEDTVLATRKQIESRNPLAFAPKVIRTTDSISETGDDSSKTPASARHKRGCNCKK
SGCLKKYCECYQGGVGCSINCRCEGCKNAFGRKDGSIFIGIDGDAEEEETDAYEKSIVDR
TSHKNLVQSDIEQNPDSAPPATPLSFGRPPMQLPFSLKNKPPRSSFLSIGSSSSGGIYGA
GQGVGRLNLFQPQPKFDKPFESVQVEEDEIMPEILQGTKSPVSGIKTASPNRKRVSPPHC
DYGNSHSHSPGRRSSRKLILQSIPSFPSLTPNP

Transcript Sequence

Gene sequence data has not been registered.